CDS
Accession Number | TCMCG007C44340 |
gbkey | CDS |
Protein Id | XP_033132025.1 |
Location | complement(join(20453826..20453987,20454067..20454183,20454256..20454710,20454810..20457357,20457685..20460751,20460811..20460875)) |
Gene | LOC103830569 |
GeneID | 103830569 |
Organism | Brassica rapa |
Protein
Length | 2137aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA249065 |
db_source | XM_033276134.1 |
Definition | protein CELLULOSE SYNTHASE INTERACTIVE 3 [Brassica rapa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGCAGATGTTGAAGACATTTCTCCCTGTGGCTCTGGAGGAAACTTTGTCTTCCTCTCAATCCAGGGAAGGCGATGTGAAAATGGAAATGGACGATCCAGAGAAGGCAATGGCTACGGTTGCTCAGCTCATAGAGCAACTCCACAGCAAAGCATCTTCTCCGCAAGACAAAGAGCTCACTACAGCTCGTCTACTTGGTATTGCGAAAAGCAGAAAGGAGGCAAGGAGGCTGATTGGTTCGTATCCCCAAGCTATGCCTTTGTTCATTTCCATGCTTAGAAATGGGACGGCTTTGGCCAAAGTCAACGTCGCTTCTATCCTTTGTGTTTTATGCAAAGACAAGGAGTTGCGACTCAAAGTGCTTCTAGGAGGATGCATCCCTCCGTTACTCTCGGTTTTGAAGTCCGGAACCATTGATACTAGGAAAGCAGCGGCAGAGGCTATATATGAGGTTTCTTCTGCTGGAGTTTCCGATGATCACATTGGCATGAAGATATTTATCACAGAAGGTGTGGTGCCGACTTTGTGGGATCAACTTAGCTTGAAAGGAAAGCAGGATAGAGTGGTTGAAGGGTACGTTACTGGAGCTTTGAGGAATCTTTGTGGTGTGGATGATGGTTATTGGAGAGTGATACTTGAGGGTAGTGGTGTTGACATAGTCGTGTCTCTTTTGTCATCTGACAATCCTAATTCTCAGGCAAATGCTGCGTCTCTCCTGGCTCGTCTTGTGCTGTCCTTTTGTGATATTATCCAGAAAATATTAAATTCTGGGGTTGTCAAGTCTCTGGTACAGCTTTTGGAACAGAAAAATGATACCAAAGTCCGTGCTAGTGCAGCAGATGCTTTGGAAGCTCTTTCATCAAGATCCGATGAAGCTAAGAAATGCGTTAAAGATGCAGGAGGTGTTAATGCTCTCATTGGAGCCATTGTTGCTCCATCGAAAGAGTGTATGCAGGGAGAAAATGGACAAGCTTTACAAGAACATGCAACTGGAGCGTTGGCGAATGTGTTTGGTGGGATGAGCCATTTAATTATATATCTTGGAGAAGTATCACAATCCCCTCGTCTAACGGAACCAATTGGTGATGTAATTGGAGCTCTTGCCTATGCTCTAATGATTTTCAAACAACCAGAGAGTTCAGAGAAAATATTTGATCCAAGAGTGATAGAGAGCATTTTGGTGAAGTTACTAAAGCCTCTTGACACAAAGTTAATCCAAGAGCGGATCTTGGAGGCTATGGCGAGTTTGTACGGAAACAGCAGTCTATCGTGTTACCTAGATGATGCAGAAGCTAAGAGAGTCCTAATCGCTCTCATAACTATGGCTTCTGCTGACGTACGAGAGAATCTTATAGCTTTCTTGTCTCGCCTATGCCATGACAAGGTTGGAATTTGGGAGGCAGTTGGGAAGAGAGAAGGAATCCAATTATTTATATCGTTTCTAGGTTTGTCTAGTGAGCAACACCAAGAGTATGCTGTTGAAATGTTGGAAATTCTGACGGCTCAGATCGATGATAGTAAATGGGCTGTAACCGCAGCCGGGGGGATTCCTCCACTTGTCCAGTTGCTTGAGACTGGATCTCAGAAGGCCAAGGAAGATGCTTCCCGCATCCTCTGGAATTTGTGCTGTCACAGTGAGGAAATCCGCGATTGTGTTGAAAGAGCTGGTGGTATTCCAGCATTCCTGTGGCTACTGAAGACTGGTGGATTGAATTCCCAGGAAACCTCTGCAAAGACACTTTTGAAGCTTGTCCGTACAGCTGATCCTGCTACAATTAATCAGTTGTTGGCTTTACTTCTGGGAGACGATCCTGCTTCAAAGGTTCATGTAATACAAGTACTGGGTCATGTGCTCTCAAAAGCTTCACAAGAAGATATTGTTCATAAAGGGTGTGCAGCTAACAAAGCACTGCGGTCCCTTGTCCAGTCCCTGACAACTTCCAGGGAAGAAACAAAGGAGCATACAGCTTCAGTTTTAGCTGATCTATTCAGCTCAAGACAAGATATATGTGACCATCTTGCAACTGATGACATCATTAATCCCTGGATCAAGCTCCTTACAAGCAACTCTCAGAATGTGGCTAAACAGGTGGCTAGGGCTTTGGACGCACTGTCCCGCCCGGTGAAGAAAAAATCTAATAAAAAGAAGGCTTACATTGCAGAAGGAGATCTTAAGGCACTCATAAAATTGGCGAAGGACTCTTCCATAGAGTCTGCAGAAAATGCAGTTTCTGCCCTGGCAAATCTTCTGTCTGATCCGGATATCGCTGCAGAAGCACTAGCTGAAGATGTTGTTTCAGCTTTCACAAGAATCCTGGCTGATGGATCTTCAGAGGGTAAGAGAAATGCATCCCGGGCACTTCATCAGTTACTTAAGAACTTTCCAGTTTGTGATGTGCTAAAGGGAAGTGCTCAGTGCCGTTTTGCTATACTTTCACTCGTTGATTCTCTAAAATCAGTAGATATGGATAGCCCAGACGCTTTCGACGTATTAGAAGTAGTTGCAGTTTTGGCAAGGGCTAAGAATGGGGTGAATTTCTCTTACCCCCCATTGACTGCCCTTTCTGAAGTGCCATCAAGCCTGGAAACCCTTGTGCAATGCCTTTCTGAAGGCCATACTCTTGTGCAAGATAAGGCAATAGAAATATTGTCCAGGCTTTGCTGTGATCAACAATTTCTGATCAGTGAACTTATAGTTTCAAGACCCAAGTCAATTGGGGTTTTGGCTGATAGAATAGTAAATGCATCCAGTTTAGAAGTGAGAGTTGGGGGGACAGCTCTGCTCTTATGTGCTACGAAAGAAAAGAAGCAGCTGATAACGGAGGCACTTGATCAGTCTGGTTTCTCAAAACTCTTGTTACGTGCCCTAGTAGATATGATAAAGGACAATTCTAAATGCTATTCTATAGAAACTGAAGTCCTGACACCTAAAGGTTTTATGGAAAAAAATGTTTTCCAGGATACAGGTGGTTTTTATTTTCCTGATCCAGCTAAAATCTTGGGTGGTACAGTGGCGTTGTGGCTGCTATGCTTACTTACTTCCGTTGATGCTAAGTCAAAGCTCATTGTCGTGGAAGCTGGCGGACTTGAGGTGCTCTTTGCGAAGCTTGCTAGGCATACTTCCAGTCCTCAGGCTGAATTTGAGGACACAGAAGGCATTTGGATTAGCGCTCTCCTCCTTGCCATCATGTTCCAGGATGACAACGTGTCCTTGTCTTCAACGACGATGCGGATTATTCCAACACTTGCACTTTTGCTAAGATCTGATGAACTGATAGATCGGTATTTCGCTGCCCACGCAATGGCTAGTCTTGTTTGTACTAAGAACAGAGGAATAAATCTGACAATTGCAAACTCAGGTGCTATTTCTGGGATTATAAACCTTCTTGGCTATGTGGAGTCAGAGATTCTCAACTTGGTTGCTTTGGCAAATGAATTTTCTCTGGTGAAAGAGCCTGATCAAGTCATTCTTCAACACCTTTTTGAAATTGAAGATGTGAGGCTTGGCTCCACCGCACGCAAATCTATCCCGCTGCTTGTAGATCTCTTAAGGCCAATTCCAGATAGGCCGGGAGCTCCTCAATTTGCCGTCCAAACCCTGATTCGCATTGCTGACGGAAGTGACACAAACAAATTACTAATGGCTGAAGCTGGAGCTGTGGAAGCTTTAACGAAATACCTTTCTCTAAGCCCTCAAGATTCAATGGAGCGCACCATATCTGAATTGCTTAGAGTATTATTTAGCAACCACGAGCTCAGACAAAACGAAGTAGCAGTTAGTTCCTTGAATCAGCTAATAGCAGTACTTCGTCTGGGGTCAAGAAGTGCAAGATACAGCGCTGCTGGAGCTCTAAATGAACTCTTTGATGCTGAAAACATCAGAAATTCTGAAATAGCTCAGCAGGCTGCTCAACCACTGATGGACATGCTCGGTACTGTATCAGAGACTGAGCAAGAGGTAGCTCTCTCGGCACTGATTAAATTAAGTTCAGGAAATACTTCGAATACAGCTCTTCTAATAGACGTGGAAGGAAGCCTGCTGGAAAATGTGAACAAAATCTTATCATCTGCTTCTGCTTCAGAGGAGTTAAAGATAAATGCTGCCAAACTCTGTTCTGTTGTTTTCTTAAATAAAAACGTCAGAGCAAGTCCATCCGCCTCGGGATGCATGAAGCCCCTGATAACACTTATGCAGTCTGAACGAAATGCAGCAGTTGAAGCAGCGGTTTGTGCTATTAAGATACTATTGGATGACGAGCAACAGCTAGAAATCGCCGCAGGTCATGACATTCAGGAGCTTCTTGTTGGGTTGGTTTCGGGAACAAATTACAGGATTATTGAGGCTAGCTTATCAGCTCTTATTAAGTTGGGCAAAGACAGAGTACCACGGAAGTTGGACATGGTGGAAGCTGGAATAATTGATCGATGTCTTGAGCTACTACCTGGAGCCTCAAGTTCGTTATGTTCCTCTGTTGCAGAGCTGTTTCGAATTTTAACAAATAGTGGAGTAATCGCCAAAAGACCTGATGTTACAAAAACTGTAGAACCTCTTTTCATGGTCTTGCTCAGATCAGACTTGACCTTATGGGGGCAACATAGCGCCTTACAAGCACTTGTAAACATTTTGGAAAAACAGCAAAGCCTTGAAGCTTTTAGTTTTACACCCAGTGAAGCCATCGTGCCTCTGATTTCATTTTTGGAGTCTTCATCTCAAGCTATCCAGCAGCTTGGAGCAGAACTTCTGAGCCATTTTCTTACAATGGAAGATTTCCAGAAAGACATCACGACACAGAATGCTGTTGTTCCTCTGGTTCGGCTTGCTGGAATTGGAATACTGAGCCTTCAGGAAACTGCAGTAAAGGCACTGGAGAAGATATCTGCTAGCTGGCCTAAGTCTGTTCTTGATGCTGGAGGTATATTCGAGCTATCCAAGGTTATTCTTCAGGAGGATCCTCAGCCACCTCTTGAGCTGTGGGAGTCCGCTGCTTTTGTTCTCTGCAATGTTCTGCAGTGTGATGCAGAATGCTTTTTCAGAGTTGAACTACCAGTTTTAGTTAAGTTGTTGTTCTCGACAATTGAAAGCACAGTGATGCTGGCTCTTAAAGCATTAATGATTCATGAGAAGAACGATGCTTCAAGCACCGTACAAATGGCTGAGCTTGGCGCAATCAACGCATTACTGGACCTCCTGAGATCTCATCAATGCGAGGAAGAATCGGGGAGCTTACTTGAAGTAATATTTAACAACCCGAAGGTAAGAGAGTTAAAGTTATGCAAATATGCGATAGCACCACTCTCTCAATATCTGTTAGACCCTCAGACAAGATCAGAACCAGGTAGGCTTCTTGCTGCGCTAGCACTTGGGGACCTTTCTCAGCATGAAGGGCTTTCTAGATCCAGTGGCTCTGTTTCCGCTTGTCGGGCACTCATTAGCGTGCTAGAAGAACAACCAACAGAAGAAATGAAAGTGGTGGCCATCTGTGCGTTGCAGAATTTTGTGATGAATAGTAGAACAAATAGGCGAGCAGTTGCAGAGGCTGGTGGCATATTGTTAATTCAGGAGCTATTGCTTTCTTCCAATGCAGAAGTATCTGGGCAGGCTGCATTAATGGTAAAATTTTTGTTCTCCAACCACACACTCCAAGAATATGTCTCTAATGAGCTTATAAGATCATTAACAGCTGCACTTGAAAGAGGCTTGTGGTCTACATCAACAATAAATATCGAAGTCTTGAGAACCTTAAATGTGATTTTCTCCAATTTTCCAAAGCTTCGCGCCTCAGAAGCTGCTACTTTCTGCATCCCTCATTTGGTCGGGGCGCTCAGATCTGGTGTTGAAGATGTCCAGGGATTAGTATTGGATATTCTCTACTTGCTAAGACACTCGTGGACGAATATGGCTATAGATGTTGCAAAATCTCAAGCCATGATTGCAGCTGAAGCAATTCCTGTCCTGCAGATGTTGATGAAAACATGCCCTCCTGTGTTCCACGACAAGGCAGACAGCTTATTACATTGCTTACCAGGTTGCTTAACAGTAAACGTTATGCGTGCCAACAACTTAAAGCAGTCCATGGCAACCACAAACGCCTTTTGTCAATTAACCATAGGAAACTGCCCTCCACGCCAAACTAAGGTTGTGAGCAATCGCACTTCTCCTGAATGGAAAGAAAGCTTTACTTGGGCATTTGATGTTCCACCCAAAGGACAAAAGCTTCACATCATATGCAAGAGCAAAAGCACATTCGGGAAGACAACTCTGGGCCGTGTCACTATCCAAATCGACAAAGTCGTGATAGAAGGAGTTTACAACGGATCTCTAAGCTTGAATCATGACAACAGCAAAGATGCATCTTCCAGATCACTCGACATTGAGATTGCATGGTCCAATAGAACAACGGATGATACTCTTTGA |
Protein: MQMLKTFLPVALEETLSSSQSREGDVKMEMDDPEKAMATVAQLIEQLHSKASSPQDKELTTARLLGIAKSRKEARRLIGSYPQAMPLFISMLRNGTALAKVNVASILCVLCKDKELRLKVLLGGCIPPLLSVLKSGTIDTRKAAAEAIYEVSSAGVSDDHIGMKIFITEGVVPTLWDQLSLKGKQDRVVEGYVTGALRNLCGVDDGYWRVILEGSGVDIVVSLLSSDNPNSQANAASLLARLVLSFCDIIQKILNSGVVKSLVQLLEQKNDTKVRASAADALEALSSRSDEAKKCVKDAGGVNALIGAIVAPSKECMQGENGQALQEHATGALANVFGGMSHLIIYLGEVSQSPRLTEPIGDVIGALAYALMIFKQPESSEKIFDPRVIESILVKLLKPLDTKLIQERILEAMASLYGNSSLSCYLDDAEAKRVLIALITMASADVRENLIAFLSRLCHDKVGIWEAVGKREGIQLFISFLGLSSEQHQEYAVEMLEILTAQIDDSKWAVTAAGGIPPLVQLLETGSQKAKEDASRILWNLCCHSEEIRDCVERAGGIPAFLWLLKTGGLNSQETSAKTLLKLVRTADPATINQLLALLLGDDPASKVHVIQVLGHVLSKASQEDIVHKGCAANKALRSLVQSLTTSREETKEHTASVLADLFSSRQDICDHLATDDIINPWIKLLTSNSQNVAKQVARALDALSRPVKKKSNKKKAYIAEGDLKALIKLAKDSSIESAENAVSALANLLSDPDIAAEALAEDVVSAFTRILADGSSEGKRNASRALHQLLKNFPVCDVLKGSAQCRFAILSLVDSLKSVDMDSPDAFDVLEVVAVLARAKNGVNFSYPPLTALSEVPSSLETLVQCLSEGHTLVQDKAIEILSRLCCDQQFLISELIVSRPKSIGVLADRIVNASSLEVRVGGTALLLCATKEKKQLITEALDQSGFSKLLLRALVDMIKDNSKCYSIETEVLTPKGFMEKNVFQDTGGFYFPDPAKILGGTVALWLLCLLTSVDAKSKLIVVEAGGLEVLFAKLARHTSSPQAEFEDTEGIWISALLLAIMFQDDNVSLSSTTMRIIPTLALLLRSDELIDRYFAAHAMASLVCTKNRGINLTIANSGAISGIINLLGYVESEILNLVALANEFSLVKEPDQVILQHLFEIEDVRLGSTARKSIPLLVDLLRPIPDRPGAPQFAVQTLIRIADGSDTNKLLMAEAGAVEALTKYLSLSPQDSMERTISELLRVLFSNHELRQNEVAVSSLNQLIAVLRLGSRSARYSAAGALNELFDAENIRNSEIAQQAAQPLMDMLGTVSETEQEVALSALIKLSSGNTSNTALLIDVEGSLLENVNKILSSASASEELKINAAKLCSVVFLNKNVRASPSASGCMKPLITLMQSERNAAVEAAVCAIKILLDDEQQLEIAAGHDIQELLVGLVSGTNYRIIEASLSALIKLGKDRVPRKLDMVEAGIIDRCLELLPGASSSLCSSVAELFRILTNSGVIAKRPDVTKTVEPLFMVLLRSDLTLWGQHSALQALVNILEKQQSLEAFSFTPSEAIVPLISFLESSSQAIQQLGAELLSHFLTMEDFQKDITTQNAVVPLVRLAGIGILSLQETAVKALEKISASWPKSVLDAGGIFELSKVILQEDPQPPLELWESAAFVLCNVLQCDAECFFRVELPVLVKLLFSTIESTVMLALKALMIHEKNDASSTVQMAELGAINALLDLLRSHQCEEESGSLLEVIFNNPKVRELKLCKYAIAPLSQYLLDPQTRSEPGRLLAALALGDLSQHEGLSRSSGSVSACRALISVLEEQPTEEMKVVAICALQNFVMNSRTNRRAVAEAGGILLIQELLLSSNAEVSGQAALMVKFLFSNHTLQEYVSNELIRSLTAALERGLWSTSTINIEVLRTLNVIFSNFPKLRASEAATFCIPHLVGALRSGVEDVQGLVLDILYLLRHSWTNMAIDVAKSQAMIAAEAIPVLQMLMKTCPPVFHDKADSLLHCLPGCLTVNVMRANNLKQSMATTNAFCQLTIGNCPPRQTKVVSNRTSPEWKESFTWAFDVPPKGQKLHIICKSKSTFGKTTLGRVTIQIDKVVIEGVYNGSLSLNHDNSKDASSRSLDIEIAWSNRTTDDTL |